Genbank

Libary for processing the NCBI genbank format

Version on this page:	1.0.3
LTS Haskell 11.14:	1.0.3
Stackage Nightly 2018-03-12:	1.0.3
Latest on Hackage:	1.0.3

See all snapshots Genbank appears in

GPL licensed by Florian Eggenhofer

Maintained by egg@tbi.univie.ac.at

Module documentation for 1.0.3

#Genbank

Haskell cabal Genbank libary contains tools, parser and datastructures for the NCBI (National Center for Biotechnology Information) Genbank format. For more information on genbank refer to:

http://www.ncbi.nlm.nih.gov/genbank/

For a sample genbank record see:

http://www.ncbi.nlm.nih.gov/Sitemap/samplerecord.html

###Datastructures for Genbank format (GenbankData.hs) Contains Haskell datastructures for Genbank format and for contained features, subfeatures ###Parse Genbank format (GenbankParser.hs) Contains Haskell functions to parse Genbank format from files or internal Strings. ###Tools for processing Genbank (GenbankTools) Contains Haskell functions to extract nucleotide sequences for features

Depends on 8 packages:

base, biocore, biofasta, bytestring, cmdargs, Genbank, parsec, split

Used by 1 package:

Genbank