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dotgen Text.Dot No documentation available.
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dotgen Text.Dot userNodeId allows a user to use their own (Int-based) node id's, without needing to remap them.
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effectful Effectful.Concurrent A ThreadId is an abstract type representing a handle to a thread. ThreadId is an instance of Eq, Ord and Show, where the Ord instance implements an arbitrary total ordering over ThreadIds. The Show instance lets you convert an arbitrary-valued ThreadId to string form; showing a ThreadId value is occasionally useful when debugging or diagnosing the behaviour of a concurrent program. Note: in GHC, if you have a ThreadId, you essentially have a pointer to the thread itself. This means the thread itself can't be garbage collected until you drop the ThreadId. This misfeature would be difficult to correct while continuing to support threadStatus.
asyncThreadId :: Async a -> ThreadIdeffectful Effectful.Concurrent.Async -
effectful Effectful.Process The platform specific type for a process identifier. This is always an integral type. Width and signedness are platform specific.
module ELynx.Character.
AminoAcid Creation date: Thu Oct 4 18:26:35 2018. See header of Alphabet. Amino acids in alphabetical order.
Amino Acid Code: Three letter Code: Amino Acid: ---------------- ------------------ ----------- A Ala Alanine C Cys Cysteine D Asp Aspartic Acid E Glu Glutamic Acid F Phe Phenylalanine G Gly Glycine H His Histidine I Ile Isoleucine K Lys Lysine L Leu Leucine M Met Methionine N Asn Asparagine P Pro Proline Q Gln Glutamine R Arg Arginine S Ser Serine T Thr Threonine V Val Valine W Trp Tryptophan Y Tyr Tyrosine
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elynx-seq ELynx.Character.AminoAcid Amino acids.
module ELynx.Character.
AminoAcidI Creation date: Thu Oct 4 18:26:35 2018. See header of Alphabet. Amino acid IUPAC code. See also https://www.bioinformatics.org/sms/iupac.html or https://en.wikipedia.org/wiki/International_Union_of_Pure_and_Applied_Chemistry. Remarks:
- Question marks (?) are interpreted as unknowns (same as X). However, when a sequence is printed/exported, Xs will be used.
- Full stops (.) are interpreted as gaps (same as -). However, when a sequence is printed/exported, -s will be used
Amino Acid Code: Three letter Code: Amino Acid: ---------------- ------------------ ----------- A Ala Alanine C Cys Cysteine D Asp Aspartic Acid E Glu Glutamic Acid F Phe Phenylalanine G Gly Glycine H His Histidine I Ile Isoleucine K Lys Lysine L Leu Leucine M Met Methionine N Asn Asparagine P Pro Proline Q Gln Glutamine R Arg Arginine S Ser Serine T Thr Threonine V Val Valine W Trp Tryptophan Y Tyr Tyrosine ---------------- ------------------ ----------- J Leucine or Isoleucine B Asx Aspartic acid or Asparagine Z Glx Glutamine or Glutamic acid ---------------- ------------------ ----------- X Xaa Any amino acid (preferred; used for printing) ? Xaa Any amino acid ---------------- ------------------ ----------- * Stp No amino acid ---------------- ------------------ ----------- - Gap No amino acid (preferred; used for printing) . Gap No amino acid
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elynx-seq ELynx.Character.AminoAcidI Amino acids.
module ELynx.Character.
AminoAcidS Creation date: Thu Oct 4 18:26:35 2018. See header of Alphabet. Amino acids with gaps and translation stops.
Amino Acid Code: Three letter Code: Amino Acid: ---------------- ------------------ ----------- A Ala Alanine C Cys Cysteine D Asp Aspartic Acid E Glu Glutamic Acid F Phe Phenylalanine G Gly Glycine H His Histidine I Ile Isoleucine K Lys Lysine L Leu Leucine M Met Methionine N Asn Asparagine P Pro Proline Q Gln Glutamine R Arg Arginine S Ser Serine T Thr Threonine V Val Valine W Trp Tryptophan Y Tyr Tyrosine ---------------- ------------------ ----------- * Stp No amino acid ---------------- ------------------ ----------- - Gap No amino acid (preferred) . Gap No amino acid