Infernal data structures and tools https://github.com/choener/BiobaseInfernal
|Latest on Hackage:||0.8.1.0|
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Low-level handling of Infernal file formats. Appropriate efficient Haskell data structures for high-performance computations with Infernal covariance models.
In particular, the _states structure provides a numerics-friendly interface to the actual model.
Christian Hoener zu Siederdissen
Leipzig University, Leipzig, Germany
- parse CM files with version 0.7 as well
updated travis file to use stack
bumped dependencies, compatible to newest BiobaseXNA, PrimitiveArray
work-in-progress release (some features missing)
working CM parsing
type defns have changed. using phantom types to specify what kind of model we are working with
using conduit instead of iteratee