BSD-3-Clause licensed by Christian Hoener zu Siederdissen
This version can be pinned in stack with:BiobaseFasta-0.4.0.1@sha256:febb9e4a2b36953b606875d00e6e3cb3b48f88494170e0aa0b783003b57d2bff,3683

Module documentation for 0.4.0.1

github action: master github action: hackage

BiobaseFasta

A Haskell library for FASTA-file handling.

The version does streaming using the ‘streaming’ library.

The library is, in general, in a “preview” state. In cases where you need to scan large FASTA files fast and with low memory overhead, the functions within should already be useable enough.

The wikipedia has information on the format:
http://en.wikipedia.org/wiki/FASTA_format

Contact

Christian Hoener zu Siederdissen
Leipzig University, Leipzig, Germany
choener@bioinf.uni-leipzig.de
http://www.bioinf.uni-leipzig.de/~choener/

Changes

0.4.0.1

  • streaming-bytestring >= 0.2
  • cleanup of older code

0.2.0.0

  • this version now uses the streaming library

0.1.0.0

  • chunk-based conduit parser
  • small number of conduit functions for different chunk types
  • quickcheck and unit tests
  • travis-ci integration
  • included stack.yaml (and working build)

0.0.1.0

  • conduit-based (0.5.6) parsing with windows